D3 · 功能、表达与分子表型

翻译效率/核糖体负载预测

Predict mean ribosome loading or translation efficiency.

Translation efficiency or ribosome-load prediction

T28mRNAregression

任务定义

输入粒度
5′UTR/CDS sequence
生物学目标
MRL or translation efficiency
输出表示
continuous value
ML formulation
regression
计数说明
NR

Benchmark coverage

5 个 benchmark 覆盖该任务

B09有公开数值结果

BEACON

Thirteen native tasks; some reuse OpenVaccine, Optimus and CRISPR datasets.

13 个 benchmark 数值协议 · 221 条 benchmark 全局结果(非 task 小计)
B10有公开数值结果

RNA-Scope

Board is public; DeepASmRNA and DeeReCT-PolyA/PAS are exposed as distinct tracks; verify exact release and frozen splits before comparative claims.

79 个 benchmark 数值协议 · 2,093 条 benchmark 全局结果(非 task 小计)
B12无公开数值结果

Benchmarking pre-trained gLMs for RNA sequence applications

Four native study processes; the GTEx tissue-specific splicing evaluation is additionally mapped to the alternative-splicing task family without changing the native-task count.

0 个 benchmark 数值协议 · 0 条 benchmark 全局结果(非 task 小计)
B33无公开数值结果

OmniGenBench

Meta-suite packaging RGB, BEACON, GUE, Genomic Benchmarks and PGB; native_task_count=5 suites, not the sum of their downstream tasks.

0 个 benchmark 数值协议 · 0 条 benchmark 全局结果(非 task 小计)
B34有公开数值结果

ERNIE-RNA downstream evaluation study

One-time model study spanning 15 named data packages; PrismNet is additionally stratified into 17 HeLa RBP assays.

12 个 benchmark 数值协议 · 231 条 benchmark 全局结果(非 task 小计)

评测协议

2 个口径单元

ProtocolTrackSplit / subset可比状态
PROT-B09-MRL-OFFICIAL-TRAIN-VALIDATION-TEST-SPLIT-MRL-2A11C11DMRL
B09-TR08
official train/validation/test split
MRL
same_table_comparable
external_data_policy;inference_budget
PROT-B10-RIBOSOME-LOADING-OFFICIAL-TEST-R2-C3F79056Ribosome Loading
B10-TR07
official test
R2
official_board_comparable
external_data_policy;inference_budget