D2 · 结构与构象

染色质三维接触预测

Predict Hi-C-like contact patterns from long sequence.

3D genome contact prediction

T19DNAstructured prediction

任务定义

输入粒度
long genomic sequence
生物学目标
chromatin contacts
输出表示
contact matrix
ML formulation
structured prediction
计数说明
NR

Benchmark coverage

2 个 benchmark 覆盖该任务

B05无公开数值结果

GenBench

Framework and dataset suite; native task count follows current release documentation.

0 个 benchmark 数值协议 · 0 条 benchmark 全局结果(非 task 小计)
B07有公开数值结果

DNALongBench

Long-range genomic tasks; exact sequence length and cell-type packaging vary by track.

2 个 benchmark 数值协议 · 6 条 benchmark 全局结果(非 task 小计)

评测协议

1 个口径单元

ProtocolTrackSplit / subset可比状态
P-B07-CMP-TABLE4DNALongBench — 3D genome contact prediction
B07-TR03
held-out test set
contact-map prediction; five primary cell lines
same_table_comparable
cross-work compute/hardware equivalence