GenBench
Framework and dataset suite; native task count follows current release documentation.
0 benchmark-wide protocols · 0 benchmark-wide rows (not a task subtotal)D2 · Structure & conformation
3D genome contact prediction
Predict Hi-C-like contact patterns from long sequence.
Task definition
- Input granularity
- long genomic sequence
- Biological target
- chromatin contacts
- Output representation
- contact matrix
- ML formulation
- structured prediction
- Counting notes
- NR
Benchmark coverage
2 benchmarks cover this task
DNALongBench
Long-range genomic tasks; exact sequence length and cell-type packaging vary by track.
2 benchmark-wide protocols · 6 benchmark-wide rows (not a task subtotal)Evaluation protocols
1 protocol units
| Protocol | Track | Split / subset | Comparability |
|---|---|---|---|
P-B07-CMP-TABLE4 | DNALongBench — 3D genome contact prediction B07-TR03 | held-out test set contact-map prediction; five primary cell lines | same_table_comparable cross-work compute/hardware equivalence |