BioBench Atlas
Nucleic-acid results
Benchmarks/B07

Tier B · benchmark_suite

Numeric results available

DNALongBench

Long-range genomic tasks; exact sequence length and cell-type packaging vary by track.

B07community_protocolnot_applicable

Result coverage

6 result rows across 2 protocols

Primary sources
primary_sources_screened
Related works
index_screen_complete
Authority readiness
discovery_only
Literature cutoff
2026-08-06
TrackNumeric coverageEvidence closureBlocker
B07-TR01
DNALongBench — Chromatin accessibility prediction		numeric_results_available
0 results		closed_no_eligible_public_numeric_resultno_eligible_public_numeric_result
B07-TR02
DNALongBench — Histone-mark prediction		numeric_results_available
0 results		closed_no_eligible_public_numeric_resultno_eligible_public_numeric_result
B07-TR03
DNALongBench — 3D genome contact prediction		numeric_results_available
1 results		closed_with_numeric_evidenceNR
B07-TR04
DNALongBench — Sequence-to-gene-expression prediction		numeric_results_available
5 results		closed_with_numeric_evidenceNR

Protocol-level results

Choose the evaluation unit before comparing scores.

Each card keeps the four claim types inside one protocol + metric fingerprint.

Sequence-to-gene-expression prediction · B07-TR04 · same_source_table

DNALongBench — Sequence-to-gene-expression prediction

Full results →

transcription initiation signal prediction; average across five assays · held-out chromosomes 8 and 9 · paper-defined held-out evaluation

Pearson rpaper-defined held-out Pearson correlation · 5 results

Official baseline

Caduceus-Ph;Caduceus-PS;CNN;HyenaDNA medium-450k;Puffin-D0.109 / 0.108 / 0.042 / 0.132 / 0.733Pearson r · fractionEvidence ↗

Original-table best

Puffin-D0.733Pearson r · fractionEvidence ↗

Official board / challenge leader

No eligible claimNo qualifying result exists in this snapshot.

Strict cross-work SOTA

No eligible claimAn original-table best is never substituted for cross-work SOTA.

Fingerprint: PMF-v1-9AC09D8D0BBEA2E636B4EE04

3D genome contact prediction · B07-TR03 · same_source_table

DNALongBench — 3D genome contact prediction

Full results →

contact-map prediction; five primary cell lines · held-out test set · paper-defined held-out evaluation

SCCstratum-adjusted correlation coefficient · 1 results

Original-table best

No eligible claimNo qualifying result exists in this snapshot.

Official board / challenge leader

No eligible claimNo qualifying result exists in this snapshot.

Strict cross-work SOTA

No eligible claimAn original-table best is never substituted for cross-work SOTA.

Fingerprint: PMF-v1-15D254AF2D9FBEA0CA05D4FE