D2 · 结构与构象

RNA 接触/距离图预测

Predict pairwise contacts or distances without full coordinates.

RNA contact or distance-map prediction

T16RNAstructured prediction

任务定义

输入粒度
sequence/MSA
生物学目标
3D proximity
输出表示
contact or distance matrix
ML formulation
structured prediction
计数说明
NR

Benchmark coverage

2 个 benchmark 覆盖该任务

B09有公开数值结果

BEACON

Thirteen native tasks; some reuse OpenVaccine, Optimus and CRISPR datasets.

13 个 benchmark 数值协议 · 221 条 benchmark 全局结果(非 task 小计)
B34有公开数值结果

ERNIE-RNA downstream evaluation study

One-time model study spanning 15 named data packages; PrismNet is additionally stratified into 17 HeLa RBP assays.

12 个 benchmark 数值协议 · 231 条 benchmark 全局结果(非 task 小计)

评测协议

3 个口径单元

ProtocolTrackSplit / subset可比状态
PROT-B09-CMP-OFFICIAL-TRAIN-VALIDATION-TEST-SPLIT-CMP-2E0FFE39CMP
B09-TR02
official train/validation/test split
CMP
same_table_comparable
external_data_policy;inference_budget
PROT-B10-RNA3DB-CONTACT-MAP-SHORT-RANGE-SHORT-L-5-AB97E493RNA3DB contact map
NR
short-range
Short@L/5
official_board_comparable
external_data_policy;inference_budget
PROT-B10-RNA3DB-CONTACT-MAP-LONG-RANGE-LONG-L-5-33EAE17ERNA3DB contact map
NR
long-range
Long@L/5
official_board_comparable
external_data_policy;inference_budget