Nucleotide Transformer benchmark
Eighteen downstream tasks are benchmark instances, not eighteen unique task families.
67 个 benchmark 数值协议 · 821 条 benchmark 全局结果（非 task 小计）D1 · 序列理解与调控
染色质可及性预测
Predict cell-type-specific accessible chromatin from DNA sequence.
Chromatin accessibility prediction
任务定义
- 输入粒度
- long sequence/window
- 生物学目标
- ATAC/DNase accessibility
- 输出表示
- continuous track or binary label
- ML formulation
- regression/classification
- 计数说明
- NR
Benchmark coverage
4 个 benchmark 覆盖该任务
BEND
Human-genome tasks with biologically aligned splits; inspect each track for leakage controls.
7 个 benchmark 数值协议 · 105 条 benchmark 全局结果（非 task 小计）DART-Eval
Regulatory DNA evaluation across zero-shot, probing and fine-tuning regimes.
0 个 benchmark 数值协议 · 0 条 benchmark 全局结果（非 task 小计）DNALongBench
Long-range genomic tasks; exact sequence length and cell-type packaging vary by track.
2 个 benchmark 数值协议 · 6 条 benchmark 全局结果（非 task 小计）评测协议
1 个口径单元
| Protocol | Track | Split / subset | 可比状态 |
|---|---|---|---|
PROT-B03-CHROMATIN-ACCESSIBILITY-OFFICIAL-1--AA381D79-8F6D5C54 | chromatin_accessibility B03-TR02 | official 1,354,042/279,422/372,153 split chromatin accessibility | same_table_comparable inference_budget |