BEACON
A 13-task RNA representation benchmark covering structure, function, processing, modification, translation, degradation, programmable switches, and CRISPR activity.
Scientific task · Sequence and regulation
RNA modification prediction
Predict RNA modification types or sites from sequence or context.
RNA修饰预测
Nucleic-acid result atlas: T11 results (exact)
Definition and search aliases
- Permanent ID
rna-modification-prediction- Aliases
- RNA modification site prediction
- Deprecated aliases
- None
- Hierarchy
- Leaf task under RNA function and design
Coverage
2 benchmark families cover this task
Biology-Instructions
A multi-omics sequence-instruction suite with 21 formal predictive tasks across DNA, RNA, protein, and multi-molecule inputs; the final paper reports task-specific held-out evaluations rather than a single aggregate score.
Biology-Instructions RNA Modification Prediction
Multi-label prediction of RNA chemical modifications, evaluated with macro area under the ROC curve.
Evidence-backed count claims
Each row keeps its original unit and basis. Rows with different units or overlapping mappings are never added.
| Benchmark | Mapped task | Coverage | Count | Version | Evidence |
|---|---|---|---|---|---|
| BEACON root: beacon-rna | RNA modification prediction official-taxonomy · high | explicitly-in-scope | 1 tasks Formal RNA benchmark tasks. | neurips-2024 | beacon-paper-definition-evidence |
| Biology-Instructions root: bioinstruction | RNA modification prediction official-track · high | explicitly-in-scope | 1 tracks Formal evaluation tracks (RNA Modification Prediction). | emnlp-2025 | bioinstruction-evidence-paper |
| Biology-Instructions RNA Modification Prediction root: bioinstruction | RNA modification prediction official-track · high | explicitly-in-scope | 309460 examples distinct examples across the published train, validation, and test splits | emnlp-2025 | bioinstruction-modification-evidence-paper |
Official evaluations connected to these benchmarks
Runs are included only for benchmark records mapped here (and formal child tracks when a mapped suite is the root). A task mapping does not imply that every run isolates this task.