RNA modification-site prediction

Predict modification status at candidate nucleotides.

Task definition

Input granularity: sequence/site
Biological target: m6A or other modification
Output representation: site probability
ML formulation: classification
Counting notes: NR

Benchmark coverage

3 benchmarks cover this task

B09Numeric results available

BEACON

Thirteen native tasks; some reuse OpenVaccine, Optimus and CRISPR datasets.

13 benchmark-wide protocols · 221 benchmark-wide rows (not a task subtotal)

B10Numeric results available

RNA-Scope

Board is public; DeepASmRNA and DeeReCT-PolyA/PAS are exposed as distinct tracks; verify exact release and frozen splits before comparative claims.

79 benchmark-wide protocols · 2,093 benchmark-wide rows (not a task subtotal)

B12No public numeric result

Benchmarking pre-trained gLMs for RNA sequence applications

Four native study processes; the GTEx tissue-specific splicing evaluation is additionally mapped to the alternative-splicing task family without changing the native-task count.

0 benchmark-wide protocols · 0 benchmark-wide rows (not a task subtotal)

Evaluation protocols

1 protocol units

Protocol	Track	Split / subset	Comparability
`PROT-B09-MODIF-OFFICIAL-TRAIN-VALIDATION-TES-0DB20FC7-D9B9A557`	Modif B09-TR07	official train/validation/test split Modif	same_table_comparable external_data_policy;inference_budget