BEACON
Thirteen native tasks; some reuse OpenVaccine, Optimus and CRISPR datasets.
13 benchmark-wide protocols · 221 benchmark-wide rows (not a task subtotal)D3 · Function, expression & molecular phenotype
Alternative polyadenylation quantification
Predict relative poly(A) site usage.
Task definition
- Input granularity
- 3′UTR sequence
- Biological target
- site usage
- Output representation
- usage distribution/continuous value
- ML formulation
- regression
- Counting notes
- NR
Benchmark coverage
2 benchmarks cover this task
ERNIE-RNA downstream evaluation study
One-time model study spanning 15 named data packages; PrismNet is additionally stratified into 17 HeLa RBP assays.
12 benchmark-wide protocols · 231 benchmark-wide rows (not a task subtotal)Evaluation protocols
1 protocol units
| Protocol | Track | Split / subset | Comparability |
|---|---|---|---|
PROT-B09-APA-OFFICIAL-TRAIN-VALIDATION-TEST-SPLIT-APA-D670A523 | APA B09-TR05 | official train/validation/test split APA | same_table_comparable external_data_policy;inference_budget |