Domain — Epigenomics
compbiobench-domain-epigenomics | 20 | tasks in the domain partition | No | Official v1 TSV domain label; partition members are non-exhaustive here because other independent partitions are also registered. |
Domain — Genomics
compbiobench-domain-genomics | 20 | tasks in the domain partition | No | Official v1 TSV domain label. |
Domain — Machine Learning
compbiobench-domain-machine-learning | 7 | tasks in the domain partition | No | Official v1 TSV domain label. |
Domain — Population Genetics
compbiobench-domain-population-genetics | 12 | tasks in the domain partition | No | Official v1 TSV domain label. |
Domain — Single-cell
compbiobench-domain-single-cell | 21 | tasks in the domain partition | No | Official v1 TSV domain label. |
Domain — Spatial
compbiobench-domain-spatial | 2 | tasks in the domain partition | No | Official v1 TSV domain label. |
Domain — Structure
compbiobench-domain-structure | 1 | tasks in the domain partition | No | The sole Structure task asks which uppercase letter a supplied PDB protein resembles across projections. |
Domain — Transcriptomics
compbiobench-domain-transcriptomics | 17 | tasks in the domain partition | No | Official v1 TSV domain label. |
Question style — Metadata Recovery
compbiobench-style-metadata-recovery | 27 | tasks in the question-style partition | No | Official v1 TSV question_style label. |
Question style — Retrieval
compbiobench-style-retrieval | 17 | tasks in the question-style partition | No | Official v1 TSV question_style label. |
Question style — Routine Analysis
compbiobench-style-routine-analysis | 22 | tasks in the question-style partition | No | Official v1 TSV question_style label. |
Question style — Synthetic/Augmented Data
compbiobench-style-synthetic-augmented | 26 | tasks in the question-style partition | No | Official v1 TSV question_style label. |
Question style — Tooling
compbiobench-style-tooling | 8 | tasks in the question-style partition | No | Official v1 TSV question_style label. |
Contributor difficulty — Level 1
compbiobench-difficulty-level-1 | 17 | tasks in the paper difficulty partition | No | Contributor ratings are approximate and were not extensively calibrated. |
Contributor difficulty — Level 2
compbiobench-difficulty-level-2 | 26 | tasks in the paper difficulty partition | No | Contributor ratings are approximate and were not extensively calibrated. |
Contributor difficulty — Level 3
compbiobench-difficulty-level-3 | 40 | tasks in the paper difficulty partition | No | Contributor ratings are approximate and were not extensively calibrated. |
Contributor difficulty — Levels 4–5
compbiobench-difficulty-levels-4-5 | 17 | tasks in the grouped hardest subset | No | The paper groups Levels 4 and 5 for its hardest-subset analysis. |
Internet required
compbiobench-internet-required | 78 | tasks whose v1 TSV internet_required field is True | No | Public v1 TSV count. |
Internet not required
compbiobench-internet-not-required | 22 | tasks whose v1 TSV internet_required field is False | No | Public v1 TSV count. |