BEACON
Thirteen native tasks; some reuse OpenVaccine, Optimus and CRISPR datasets.
13 benchmark-wide protocols · 221 benchmark-wide rows (not a task subtotal)D6 · Generation & design
CRISPR guide on-target design
Design guides for high on-target efficiency.
Task definition
- Input granularity
- target locus
- Biological target
- on-target editing efficacy
- Output representation
- guide sequence/rank
- ML formulation
- ranking/optimization
- Counting notes
- NR
Benchmark coverage
1 benchmarks cover this task
Evaluation protocols
8 protocol units
| Protocol | Track | Split / subset | Comparability |
|---|---|---|---|
PROT-B09-CRI-ON-OFFICIAL-TRAIN-VALIDATION-TE-BCFB91FC-34190A8B | CRI-On B09-TR11 | official train/validation/test split CRI-On | same_table_comparable external_data_policy;inference_budget |
PROT-B10-GRNA-EFFICIENCY-AVERAGE-OF-SIX-GRNA-B992E61C-1620A501 | gRNA Efficiency NR | average of six gRNA datasets Mean Spearman rho | official_board_comparable external_data_policy;inference_budget |
PROT-B10-GRNA-EFFICIENCY-MECS-KOIKE-YUSA-SPEARMAN-RHO-2D8A0022 | gRNA Efficiency NR | mECS (Koike-Yusa) Spearman rho | official_board_comparable external_data_policy;inference_budget |
PROT-B10-GRNA-EFFICIENCY-HEL-LABUHN-SPEARMAN-RHO-90481160 | gRNA Efficiency NR | HEL (Labuhn) Spearman rho | official_board_comparable external_data_policy;inference_budget |
PROT-B10-GRNA-EFFICIENCY-A375-SHALEM-SPEARMAN-RHO-AB8C9961 | gRNA Efficiency NR | A375 (Shalem) Spearman rho | official_board_comparable external_data_policy;inference_budget |
PROT-B10-GRNA-EFFICIENCY-HEK293T-XI-XIANG-SP-6CF3B703-4270E12E | gRNA Efficiency NR | HEK293T (Xi Xiang) Spearman rho | official_board_comparable external_data_policy;inference_budget |
PROT-B10-GRNA-EFFICIENCY-ZEBRAFISH-GAGNON-SP-53EA7462-88EDD527 | gRNA Efficiency NR | Zebrafish (Gagnon) Spearman rho | official_board_comparable external_data_policy;inference_budget |
PROT-B10-GRNA-EFFICIENCY-ZEBRAFISH-SHKUMATAV-A53E1C80-BA8CABC8 | gRNA Efficiency NR | Zebrafish (Shkumatava) Spearman rho | official_board_comparable external_data_policy;inference_budget |