HARIBOSS / RNA–small-molecule structure benchmark
Useful for binding and docking, but not a single standardized leaderboard.
0 benchmark-wide protocols · 0 benchmark-wide rows (not a task subtotal)D5 · Interaction & complexes
RNA–small-molecule binding prediction
Predict whether and how strongly small molecules bind RNA.
Task definition
- Input granularity
- RNA sequence/structure plus ligand
- Biological target
- binding
- Output representation
- probability/affinity
- ML formulation
- classification/regression
- Counting notes
- NR
Benchmark coverage
5 benchmarks cover this task
R-SIM / RNAmigos2 benchmark
Decoy construction and pocket redundancy are material evaluation choices.
0 benchmark-wide protocols · 0 benchmark-wide rows (not a task subtotal)RNAglib structure–function benchmark
Seven RNA structure–function datasets; task-level splits and structural redundancy controls should be preserved.
0 benchmark-wide protocols · 0 benchmark-wide rows (not a task subtotal)SMRTnet RNA–small-molecule benchmark
Emerging benchmark for RNA–small-molecule interaction; check release artifacts and negative construction.
0 benchmark-wide protocols · 0 benchmark-wide rows (not a task subtotal)AptaBench
6,289 DNA/RNA aptamer–ligand records with fixed stratified, ligand-disjoint and aptamer-disjoint five-fold protocols; anonymous pre-review status should be preserved.
0 benchmark-wide protocols · 0 benchmark-wide rows (not a task subtotal)Evaluation protocols
0 protocol units
This task has benchmark mappings but no reconstructable numeric protocol in the current snapshot.