D1 · Sequence understanding & regulation

Alternative splicing pattern prediction

Predict splice pattern or exon inclusion without a specific variant perturbation.

T08pre-mRNA/DNAclassification/regression

Task definition

Input granularity
transcript/region
Biological target
exon inclusion or splice pattern
Output representation
class or PSI
ML formulation
classification/regression
Counting notes
NR

Benchmark coverage

2 benchmarks cover this task

B10Numeric results available

RNA-Scope

Board is public; DeepASmRNA and DeeReCT-PolyA/PAS are exposed as distinct tracks; verify exact release and frozen splits before comparative claims.

79 benchmark-wide protocols · 2,093 benchmark-wide rows (not a task subtotal)
B12No public numeric result

Benchmarking pre-trained gLMs for RNA sequence applications

Four native study processes; the GTEx tissue-specific splicing evaluation is additionally mapped to the alternative-splicing task family without changing the native-task count.

0 benchmark-wide protocols · 0 benchmark-wide rows (not a task subtotal)

Evaluation protocols

3 protocol units

ProtocolTrackSplit / subsetComparability
PROT-B10-SPLICING-EVENT-HUMAN-F1-3C34AF41Splicing Event
B10-TR11
human
F1
official_board_comparable
external_data_policy;inference_budget
PROT-B10-SPLICING-EVENT-ARA-F1-F0025D6ASplicing Event
B10-TR11
ara
F1
official_board_comparable
external_data_policy;inference_budget
PROT-B10-SPLICING-EVENT-RICE-F1-BB4E85B0Splicing Event
B10-TR11
rice
F1
official_board_comparable
external_data_policy;inference_budget