| Biology-Instructions Antibody-Antigen Neutralization | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-aan-closed-baselines
bioinstruction-aan-closed-baselines-emnlp-2025 | MCC | 1.59 percent |
| Biology-Instructions APA Isoform Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-apa-closed-baselines
bioinstruction-apa-closed-baselines-emnlp-2025 | R2 | 0.05 percent |
| Biology-Instructions Core Promoter Detection | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-cpd-closed-baselines
bioinstruction-cpd-closed-baselines-emnlp-2025 | MCC | -2.95 percent |
| Biology-Instructions CRISPR On-Target Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-crispr-on-target-closed-baselines
bioinstruction-crispr-on-target-closed-baselines-emnlp-2025 | Spearman's ρ | 3.77 percent |
| Biology-Instructions Enhancer Activity Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-ea-closed-baselines
bioinstruction-ea-closed-baselines-emnlp-2025 | PCC (housekeeping enhancer activity) | -0.76 percent |
| Biology-Instructions Enhancer Activity Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-ea-closed-baselines
bioinstruction-ea-closed-baselines-emnlp-2025 | PCC (developmental enhancer activity) | 0.09 percent |
| Biology-Instructions Enzyme Commission Number Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-ec-closed-baselines
bioinstruction-ec-closed-baselines-emnlp-2025 | Fmax | 1.73 percent |
| Biology-Instructions Epigenetic Marks Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-emp-closed-baselines
bioinstruction-emp-closed-baselines-emnlp-2025 | MCC | -0.91 percent |
| Biology-Instructions Enhancer-Promoter Interaction Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-epi-closed-baselines
bioinstruction-epi-closed-baselines-emnlp-2025 | MCC | -0.39 percent |
| Biology-Instructions Protein Fluorescence Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-fluorescence-closed-baselines
bioinstruction-fluorescence-closed-baselines-emnlp-2025 | Spearman's ρ | -0.47 percent |
| Biology-Instructions RNA Modification Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-modification-closed-baselines
bioinstruction-modification-closed-baselines-emnlp-2025 | AUC | 50.49 percent |
| Biology-Instructions Mean Ribosome Loading Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-mrl-closed-baselines
bioinstruction-mrl-closed-baselines-emnlp-2025 | R2 | 0.01 percent |
| Biology-Instructions Non-coding RNA Function Classification | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-ncrna-closed-baselines
bioinstruction-ncrna-closed-baselines-emnlp-2025 | Accuracy | 3 percent |
| Biology-Instructions Promoter Detection 300 | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-pd300-closed-baselines
bioinstruction-pd300-closed-baselines-emnlp-2025 | MCC | -4.44 percent |
| Biology-Instructions Programmable RNA Switches | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-prs-closed-baselines
bioinstruction-prs-closed-baselines-emnlp-2025 | R2 | 0.03 percent |
| Biology-Instructions RNA-Protein Interaction Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-rpi-closed-baselines
bioinstruction-rpi-closed-baselines-emnlp-2025 | MCC | 1.22 percent |
| Biology-Instructions siRNA Efficiency Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-sirna-closed-baselines
bioinstruction-sirna-closed-baselines-emnlp-2025 | Mixed Score | 30.37 percent |
| Biology-Instructions Protein Solubility Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-solubility-closed-baselines
bioinstruction-solubility-closed-baselines-emnlp-2025 | Accuracy | 50.02 percent |
| Biology-Instructions Protein Stability Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-stability-closed-baselines
bioinstruction-stability-closed-baselines-emnlp-2025 | Spearman's ρ | -1.52 percent |
| Biology-Instructions Human Transcription Binding Sites Detection | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-tb-human-closed-baselines
bioinstruction-tb-human-closed-baselines-emnlp-2025 | MCC | 0.14 percent |
| Biology-Instructions Mouse Transcription Binding Sites Detection | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-tb-mouse-closed-baselines
bioinstruction-tb-mouse-closed-baselines-emnlp-2025 | MCC | -0.31 percent |
| Biology-Instructions Protein Thermostability Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-thermostability-closed-baselines
bioinstruction-thermostability-closed-baselines-emnlp-2025 | Spearman's ρ | 0.32 percent |