| Biology-Instructions Antibody-Antigen Neutralization | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-aan-open-baselines
bioinstruction-aan-open-baselines-emnlp-2025 | MCC | -0.81 percent |
| Biology-Instructions APA Isoform Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-apa-open-baselines
bioinstruction-apa-open-baselines-emnlp-2025 | R2 | 0 percent |
| Biology-Instructions Core Promoter Detection | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-cpd-open-baselines
bioinstruction-cpd-open-baselines-emnlp-2025 | MCC | -1.3 percent |
| Biology-Instructions CRISPR On-Target Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-crispr-on-target-open-baselines
bioinstruction-crispr-on-target-open-baselines-emnlp-2025 | Spearman's ρ | -3.55 percent |
| Biology-Instructions Enhancer Activity Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-ea-open-baselines
bioinstruction-ea-open-baselines-emnlp-2025 | PCC (housekeeping enhancer activity) | -0.11 percent |
| Biology-Instructions Enhancer Activity Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-ea-open-baselines
bioinstruction-ea-open-baselines-emnlp-2025 | PCC (developmental enhancer activity) | 0.31 percent |
| Biology-Instructions Enzyme Commission Number Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-ec-open-baselines
bioinstruction-ec-open-baselines-emnlp-2025 | Fmax | 0.88 percent |
| Biology-Instructions Epigenetic Marks Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-emp-open-baselines
bioinstruction-emp-open-baselines-emnlp-2025 | MCC | -0.36 percent |
| Biology-Instructions Enhancer-Promoter Interaction Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-epi-open-baselines
bioinstruction-epi-open-baselines-emnlp-2025 | MCC | 0 percent |
| Biology-Instructions Protein Fluorescence Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-fluorescence-open-baselines
bioinstruction-fluorescence-open-baselines-emnlp-2025 | Spearman's ρ | -0.2 percent |
| Biology-Instructions RNA Modification Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-modification-open-baselines
bioinstruction-modification-open-baselines-emnlp-2025 | AUC | 50 percent |
| Biology-Instructions Mean Ribosome Loading Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-mrl-open-baselines
bioinstruction-mrl-open-baselines-emnlp-2025 | R2 | 0.03 percent |
| Biology-Instructions Non-coding RNA Function Classification | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-ncrna-open-baselines
bioinstruction-ncrna-open-baselines-emnlp-2025 | Accuracy | 7.42 percent |
| Biology-Instructions Promoter Detection 300 | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-pd300-open-baselines
bioinstruction-pd300-open-baselines-emnlp-2025 | MCC | -0.15 percent |
| Biology-Instructions Programmable RNA Switches | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-prs-open-baselines
bioinstruction-prs-open-baselines-emnlp-2025 | R2 | 0.01 percent |
| Biology-Instructions RNA-Protein Interaction Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-rpi-open-baselines
bioinstruction-rpi-open-baselines-emnlp-2025 | MCC | 4.38 percent |
| Biology-Instructions siRNA Efficiency Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-sirna-open-baselines
bioinstruction-sirna-open-baselines-emnlp-2025 | Mixed Score | 19.12 percent |
| Biology-Instructions Protein Solubility Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-solubility-open-baselines
bioinstruction-solubility-open-baselines-emnlp-2025 | Accuracy | 50.12 percent |
| Biology-Instructions Protein Stability Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-stability-open-baselines
bioinstruction-stability-open-baselines-emnlp-2025 | Spearman's ρ | 2.05 percent |
| Biology-Instructions Human Transcription Binding Sites Detection | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-tb-human-open-baselines
bioinstruction-tb-human-open-baselines-emnlp-2025 | MCC | 2 percent |
| Biology-Instructions Mouse Transcription Binding Sites Detection | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-tb-mouse-open-baselines
bioinstruction-tb-mouse-open-baselines-emnlp-2025 | MCC | 0 percent |
| Biology-Instructions Protein Thermostability Prediction | Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models | bioinstruction-thermostability-open-baselines
bioinstruction-thermostability-open-baselines-emnlp-2025 | Spearman's ρ | 2.27 percent |